make_hgrid
Note
The uwtools drivers are idempotent, meaning that actions they successfully complete during one invocation are not repeated in subsequent invocations. For example, an asset like a configuration file will not be recreated when the driver is run again, even if its UW YAML configuration changes. To force recreation, remove the asset(s) in question – up to and including the entire provisioned run directory – then re-run the driver, which will recreate any missing assets based on the current configuration.
The uw mode for configuring and running the UFS Utils preprocessing component make_hgrid. Documentation for this UFS Utils component is here.
uw make_hgrid --help
usage: uw make_hgrid [-h] [--version] [--show-schema] TASK ...
Execute make_hgrid tasks
Optional arguments:
-h, --help
Show help and exit
--version
Show version info and exit
--show-schema
Show driver schema and exit
Positional arguments:
TASK
provisioned_rundir
Run directory provisioned with all required content
run
A run
runscript
The runscript
show_output
Show the output to be created by this component
validate
Validate the UW driver config
All tasks take the same arguments. For example:
uw make_hgrid run --help
usage: uw make_hgrid run [-h] [--version] [--config-file PATH] [--batch]
[--dry-run] [--graph-file PATH]
[--key-path KEY[.KEY...]] [--schema-file PATH]
[--quiet] [--verbose]
A run
Optional arguments:
-h, --help
Show help and exit
--version
Show version info and exit
--config-file PATH, -c PATH
Path to UW YAML config file (default: read from stdin)
--batch
Submit job to batch scheduler
--dry-run
Only log info, making no changes
--graph-file PATH
Path to Graphviz DOT output [experimental]
--key-path KEY[.KEY...]
Dot-separated path of keys to driver config block
--schema-file PATH
Path to schema file to use for validation
--quiet, -q
Print no logging messages
--verbose, -v
Print all logging messages
Examples
The examples use a configuration file named config.yaml with contents similar to:
make_hgrid:
config:
do_schmidt: true
great_circle_algorithm: true
grid_name: C96_foo
grid_type: gnomonic_ed
halo: 1
iend_nest:
- 87
istart_nest:
- 10
jend_nest:
- 78
jstart_nest:
- 19
nest_grids: 1
nlon:
- 192
parent_tile:
- 6
refine_ratio:
- 2
stretch_factor: 1.0001
target_lat: 38.5
target_lon: -97.5
execution:
batchargs:
nodes: 1
stdout: /path/to/runscript.out
walltime: "08:00:00"
executable: /path/to/make_hgrid
rundir: /path/to/run/dir
Its contents are described in section make_hgrid.
Run
make_hgridon an interactive node$ uw make_hgrid run --config-file config.yaml
The driver creates a
runscript.make_hgridfile in the directory specified byrundir:in the config and runs it, executingmake_hgrid.An example runscript:
rm -f runscript.make_hgrid base=../../../../../shared/make_hgrid.yaml echo "make_hgrid: {rundir: $PWD}" | uw config realize --input-file $base --update-format yaml --output-file config.yaml uw make_hgrid runscript --config-file config.yaml 2>/dev/null cat runscript.make_hgrid#!/bin/bash time /path/to/make_hgrid --do_schmidt --great_circle_algorithm --grid_name C96_foo --grid_type gnomonic_ed --halo 1 --iend_nest 87 --istart_nest 10 --jend_nest 78 --jstart_nest 19 --nest_grids 1 --nlon 192 --parent_tile 6 --refine_ratio 2 --stretch_factor 1.0001 --target_lat 38.5 --target_lon -97.5 test $? -eq 0 && touch runscript.make_hgrid.done
Run
make_hgridvia a batch job$ uw make_hgrid run --config-file config.yaml --batch
The driver creates a
runscript.make_hgridfile in the directory specified byrundir:in the config and submits it to the batch system. Running with--batchrequires a correctly configuredplatform:block inconfig.yaml, as well as appropriate settings in theexecution:block undermake_hgrid:.Specifying the
--dry-runflag results in the driver logging messages about actions it would have taken, without actually taking any.$ uw make_hgrid run --config-file config.yaml --batch --dry-run
The
--key-pathoption can be used to navigate from the top of the config to the driver’s configuration block. For example, specifying--key-path foo.barwith configfoo: bar: driver: # driver config block
is equivalent to using config
driver: # driver config block
without specifying
--key-path.
Specifying the
--show-schemaflag, with no other options, prints the driver’s schema:uw make_hgrid --show-schema >schema head -n20 schema{ "properties": { "make_hgrid": { "additionalProperties": false, "properties": { "config": { "additionalProperties": false, "allOf": [ { "if": { "properties": { "grid_type": { "const": "from_file" } } }, "then": { "required": [ "my_grid_file" ]Use the
--schema-fileoption to specify a custom JSON Schema file with which to validate the driver config. A custom schema could range in complexity from the simplest, most permissive schema,{}, to one based on the internal schema shown by--show-schema.